Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Ubp1Q811S7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ubp1Q811S7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ubp1Q811S7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ubp1Q811S7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ubp1Q811S7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ubp1Q811S7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ubp1Q811S7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubp1Q811S7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubp1Q811S7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Ubp1Q811S7 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.75■□□□□ 0.27
Ubp1Q811S7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubp1Q811S7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ubp1Q811S7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ubp1Q811S7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Ubp1Q811S7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubp1Q811S7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ubp1Q811S7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ubp1Q811S7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ubp1Q811S7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubp1Q811S7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubp1Q811S7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ubp1Q811S7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubp1Q811S7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ubp1Q811S7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubp1Q811S7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Gm13559-201ENSMUST00000120476 863 ntBASIC16.74■□□□□ 0.27
Ubp1Q811S7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.74■□□□□ 0.27
Ubp1Q811S7 Mir7071-201ENSMUST00000184847 69 ntBASIC16.74■□□□□ 0.27
Ubp1Q811S7 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.74■□□□□ 0.27
Ubp1Q811S7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ubp1Q811S7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubp1Q811S7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.73■□□□□ 0.27
Ubp1Q811S7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.73■□□□□ 0.27
Ubp1Q811S7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubp1Q811S7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ubp1Q811S7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ubp1Q811S7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ubp1Q811S7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.72■□□□□ 0.27
Ubp1Q811S7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms