Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 AW822252-206ENSMUST00000208904 237 ntBASIC19.59■□□□□ 0.73
Prpf40bQ80W14 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf40bQ80W14 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Prpf40bQ80W14 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Prpf40bQ80W14 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf40bQ80W14 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.58■□□□□ 0.72
Prpf40bQ80W14 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf40bQ80W14 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf40bQ80W14 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf40bQ80W14 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.57■□□□□ 0.72
Prpf40bQ80W14 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Gm27742-201ENSMUST00000184667 60 ntBASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Gm28659-201ENSMUST00000188013 759 ntBASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Gm34391-201ENSMUST00000203706 907 ntBASIC19.57■□□□□ 0.72
Prpf40bQ80W14 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf40bQ80W14 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf40bQ80W14 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf40bQ80W14 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf40bQ80W14 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf40bQ80W14 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf40bQ80W14 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf40bQ80W14 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf40bQ80W14 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf40bQ80W14 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf40bQ80W14 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.56■□□□□ 0.72
Prpf40bQ80W14 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf40bQ80W14 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf40bQ80W14 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf40bQ80W14 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Prpf40bQ80W14 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf40bQ80W14 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.54■□□□□ 0.72
Prpf40bQ80W14 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.54■□□□□ 0.72
Prpf40bQ80W14 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Prpf40bQ80W14 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf40bQ80W14 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.54■□□□□ 0.72
Prpf40bQ80W14 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf40bQ80W14 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Prpf40bQ80W14 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.54■□□□□ 0.72
Prpf40bQ80W14 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Prpf40bQ80W14 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Prpf40bQ80W14 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf40bQ80W14 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.54■□□□□ 0.72
Prpf40bQ80W14 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf40bQ80W14 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf40bQ80W14 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf40bQ80W14 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf40bQ80W14 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf40bQ80W14 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf40bQ80W14 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf40bQ80W14 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf40bQ80W14 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf40bQ80W14 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Prpf40bQ80W14 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf40bQ80W14 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf40bQ80W14 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Prpf40bQ80W14 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf40bQ80W14 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf40bQ80W14 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms