Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Gm7370-201ENSMUST00000219471 767 ntBASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpp38Q80UU2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpp38Q80UU2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpp38Q80UU2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpp38Q80UU2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpp38Q80UU2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Rpp38Q80UU2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
Rpp38Q80UU2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rpp38Q80UU2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.96■□□□□ 0.31
Rpp38Q80UU2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rpp38Q80UU2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpp38Q80UU2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpp38Q80UU2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpp38Q80UU2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpp38Q80UU2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rpp38Q80UU2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpp38Q80UU2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Rpp38Q80UU2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Rpp38Q80UU2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Gm16061-201ENSMUST00000122167 857 ntBASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Gm13474-201ENSMUST00000122466 815 ntBASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpp38Q80UU2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpp38Q80UU2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rpp38Q80UU2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpp38Q80UU2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpp38Q80UU2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpp38Q80UU2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpp38Q80UU2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpp38Q80UU2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpp38Q80UU2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpp38Q80UU2 Gm13216-201ENSMUST00000117145 591 ntBASIC16.94■□□□□ 0.3
Rpp38Q80UU2 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.94■□□□□ 0.3
Rpp38Q80UU2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Rpp38Q80UU2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpp38Q80UU2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Gm43799-201ENSMUST00000201845 579 ntBASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.93■□□□□ 0.3
Rpp38Q80UU2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rpp38Q80UU2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms