Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Gm6345-202ENSMUST00000180900 204 ntBASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh19Q80TF3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh19Q80TF3 Gm9013-201ENSMUST00000132939 882 ntBASIC16.71■□□□□ 0.27
Pcdh19Q80TF3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh19Q80TF3 Gm33142-201ENSMUST00000193913 867 ntBASIC16.71■□□□□ 0.27
Pcdh19Q80TF3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pcdh19Q80TF3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh19Q80TF3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh19Q80TF3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Pcdh19Q80TF3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh19Q80TF3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdh19Q80TF3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdh19Q80TF3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdh19Q80TF3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdh19Q80TF3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh19Q80TF3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdh19Q80TF3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdh19Q80TF3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdh19Q80TF3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh19Q80TF3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh19Q80TF3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh19Q80TF3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh19Q80TF3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh19Q80TF3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdh19Q80TF3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh19Q80TF3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh19Q80TF3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh19Q80TF3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh19Q80TF3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Gm14859-201ENSMUST00000117752 357 ntBASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Gm11355-201ENSMUST00000121120 306 ntBASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh19Q80TF3 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.68■□□□□ 0.26
Pcdh19Q80TF3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh19Q80TF3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.68■□□□□ 0.26
Pcdh19Q80TF3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh19Q80TF3 Gm26039-201ENSMUST00000158152 144 ntBASIC16.68■□□□□ 0.26
Pcdh19Q80TF3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdh19Q80TF3 Gm5587-201ENSMUST00000206270 674 ntBASIC16.68■□□□□ 0.26
Pcdh19Q80TF3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.68■□□□□ 0.26
Pcdh19Q80TF3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh19Q80TF3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh19Q80TF3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh19Q80TF3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh19Q80TF3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh19Q80TF3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Gm8969-201ENSMUST00000199694 526 ntBASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh19Q80TF3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh19Q80TF3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms