Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg5Q71M36 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg5Q71M36 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.6■□□□□ 0.41
Cspg5Q71M36 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.6■□□□□ 0.41
Cspg5Q71M36 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg5Q71M36 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Gm28033-201ENSMUST00000184224 96 ntBASIC17.6■□□□□ 0.41
Cspg5Q71M36 Gm7370-201ENSMUST00000219471 767 ntBASIC17.6■□□□□ 0.41
Cspg5Q71M36 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg5Q71M36 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cspg5Q71M36 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.59■□□□□ 0.41
Cspg5Q71M36 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Gm17808-201ENSMUST00000200859 894 ntBASIC17.59■□□□□ 0.41
Cspg5Q71M36 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cspg5Q71M36 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cspg5Q71M36 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Cspg5Q71M36 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cspg5Q71M36 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cspg5Q71M36 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Gm29518-201ENSMUST00000190858 372 ntBASIC17.58■□□□□ 0.4
Cspg5Q71M36 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg5Q71M36 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.58■□□□□ 0.4
Cspg5Q71M36 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg5Q71M36 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms