Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.31□□□□□ -0.12
Rif1Q6PR54 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Gm18187-201ENSMUST00000196476 984 ntBASIC14.31□□□□□ -0.12
Rif1Q6PR54 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rif1Q6PR54 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.3□□□□□ -0.12
Rif1Q6PR54 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.3□□□□□ -0.12
Rif1Q6PR54 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.3□□□□□ -0.12
Rif1Q6PR54 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rif1Q6PR54 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.29□□□□□ -0.12
Rif1Q6PR54 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.29□□□□□ -0.12
Rif1Q6PR54 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.29□□□□□ -0.12
Rif1Q6PR54 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.29□□□□□ -0.12
Rif1Q6PR54 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.29□□□□□ -0.12
Rif1Q6PR54 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.29□□□□□ -0.12
Rif1Q6PR54 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rif1Q6PR54 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rif1Q6PR54 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Rif1Q6PR54 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rif1Q6PR54 Gm11764-201ENSMUST00000120221 623 ntBASIC14.27□□□□□ -0.12
Rif1Q6PR54 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rif1Q6PR54 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rif1Q6PR54 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Rif1Q6PR54 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rif1Q6PR54 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rif1Q6PR54 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rif1Q6PR54 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rif1Q6PR54 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.27□□□□□ -0.13
Rif1Q6PR54 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Rif1Q6PR54 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rif1Q6PR54 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rif1Q6PR54 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rif1Q6PR54 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rif1Q6PR54 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms