Protein–RNA interactions for Protein: Q6PGE7

Slc6a7, Sodium-dependent proline transporter, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a7Q6PGE7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Slc6a7Q6PGE7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Gm2399-201ENSMUST00000104944 225 ntBASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Gm11249-201ENSMUST00000117071 859 ntBASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a7Q6PGE7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Gm13836-201ENSMUST00000121159 501 ntBASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Gm18666-201ENSMUST00000190039 958 ntBASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a7Q6PGE7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Gm7977-201ENSMUST00000193787 748 ntBASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a7Q6PGE7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Slc6a7Q6PGE7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.52■□□□□ 0.07
Slc6a7Q6PGE7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc6a7Q6PGE7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Slc6a7Q6PGE7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Slc6a7Q6PGE7 Haglr-201ENSMUST00000100000 2085 ntBASIC15.52■□□□□ 0.07
Slc6a7Q6PGE7 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.51■□□□□ 0.07
Slc6a7Q6PGE7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a7Q6PGE7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a7Q6PGE7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a7Q6PGE7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a7Q6PGE7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Slc6a7Q6PGE7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a7Q6PGE7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a7Q6PGE7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms