Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CtifQ6PEE2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CtifQ6PEE2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.18■□□□□ 0.5
CtifQ6PEE2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CtifQ6PEE2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.18■□□□□ 0.5
CtifQ6PEE2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CtifQ6PEE2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CtifQ6PEE2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CtifQ6PEE2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CtifQ6PEE2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CtifQ6PEE2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CtifQ6PEE2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CtifQ6PEE2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CtifQ6PEE2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.16■□□□□ 0.5
CtifQ6PEE2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CtifQ6PEE2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CtifQ6PEE2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Prob1-201ENSMUST00000097619 3021 ntBASIC18.15■□□□□ 0.5
CtifQ6PEE2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CtifQ6PEE2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.15■□□□□ 0.5
CtifQ6PEE2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CtifQ6PEE2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CtifQ6PEE2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CtifQ6PEE2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
CtifQ6PEE2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CtifQ6PEE2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CtifQ6PEE2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Gm43060-201ENSMUST00000200621 289 ntBASIC18.14■□□□□ 0.49
CtifQ6PEE2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CtifQ6PEE2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CtifQ6PEE2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms