Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ShbQ6PD21 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ShbQ6PD21 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShbQ6PD21 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShbQ6PD21 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShbQ6PD21 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ShbQ6PD21 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShbQ6PD21 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ShbQ6PD21 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShbQ6PD21 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShbQ6PD21 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ShbQ6PD21 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ShbQ6PD21 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShbQ6PD21 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
ShbQ6PD21 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShbQ6PD21 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ShbQ6PD21 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.42■□□□□ 0.54
ShbQ6PD21 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShbQ6PD21 Gm7506-201ENSMUST00000207758 815 ntBASIC18.42■□□□□ 0.54
ShbQ6PD21 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.42■□□□□ 0.54
ShbQ6PD21 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShbQ6PD21 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ShbQ6PD21 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShbQ6PD21 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShbQ6PD21 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShbQ6PD21 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShbQ6PD21 Gm26308-201ENSMUST00000157768 69 ntBASIC18.41■□□□□ 0.54
ShbQ6PD21 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.41■□□□□ 0.54
ShbQ6PD21 Gm10175-201ENSMUST00000086013 645 ntBASIC18.41■□□□□ 0.54
ShbQ6PD21 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ShbQ6PD21 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.41■□□□□ 0.54
ShbQ6PD21 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShbQ6PD21 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShbQ6PD21 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ShbQ6PD21 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShbQ6PD21 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShbQ6PD21 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShbQ6PD21 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ShbQ6PD21 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ShbQ6PD21 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.4■□□□□ 0.54
ShbQ6PD21 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.4■□□□□ 0.54
ShbQ6PD21 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.4■□□□□ 0.54
ShbQ6PD21 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShbQ6PD21 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.4■□□□□ 0.54
ShbQ6PD21 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ShbQ6PD21 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.4■□□□□ 0.54
ShbQ6PD21 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShbQ6PD21 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.4■□□□□ 0.54
ShbQ6PD21 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ShbQ6PD21 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShbQ6PD21 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ShbQ6PD21 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShbQ6PD21 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.39■□□□□ 0.54
ShbQ6PD21 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ShbQ6PD21 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.54
ShbQ6PD21 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ShbQ6PD21 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ShbQ6PD21 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ShbQ6PD21 Gm13036-201ENSMUST00000117799 748 ntBASIC18.39■□□□□ 0.53
ShbQ6PD21 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.39■□□□□ 0.53
ShbQ6PD21 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ShbQ6PD21 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ShbQ6PD21 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ShbQ6PD21 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ShbQ6PD21 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ShbQ6PD21 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ShbQ6PD21 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ShbQ6PD21 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ShbQ6PD21 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ShbQ6PD21 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ShbQ6PD21 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ShbQ6PD21 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ShbQ6PD21 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
ShbQ6PD21 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.38■□□□□ 0.53
ShbQ6PD21 Gm6550-201ENSMUST00000187574 993 ntBASIC18.38■□□□□ 0.53
ShbQ6PD21 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.38■□□□□ 0.53
ShbQ6PD21 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.38■□□□□ 0.53
ShbQ6PD21 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
ShbQ6PD21 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ShbQ6PD21 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ShbQ6PD21 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ShbQ6PD21 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ShbQ6PD21 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ShbQ6PD21 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ShbQ6PD21 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ShbQ6PD21 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ShbQ6PD21 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ShbQ6PD21 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.37■□□□□ 0.53
ShbQ6PD21 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ShbQ6PD21 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ShbQ6PD21 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ShbQ6PD21 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ShbQ6PD21 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
ShbQ6PD21 Gm15920-201ENSMUST00000118998 402 ntBASIC18.36■□□□□ 0.53
ShbQ6PD21 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms