Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.06■□□□□ 0.16
Snrnp200Q6P4T2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Snrnp200Q6P4T2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Snrnp200Q6P4T2 Gm37722-201ENSMUST00000193757 208 ntBASIC16.06■□□□□ 0.16
Snrnp200Q6P4T2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Snrnp200Q6P4T2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Snrnp200Q6P4T2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp200Q6P4T2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 AA414768-201ENSMUST00000121924 1257 ntBASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp200Q6P4T2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Mir5130-201ENSMUST00000175160 84 ntBASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp200Q6P4T2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp200Q6P4T2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Snrnp200Q6P4T2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp200Q6P4T2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp200Q6P4T2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp200Q6P4T2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.02■□□□□ 0.16
Snrnp200Q6P4T2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.02■□□□□ 0.16
Snrnp200Q6P4T2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp200Q6P4T2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp200Q6P4T2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp200Q6P4T2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Snrnp200Q6P4T2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Snrnp200Q6P4T2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Snrnp200Q6P4T2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Snrnp200Q6P4T2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Snrnp200Q6P4T2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Snrnp200Q6P4T2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Snrnp200Q6P4T2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Snrnp200Q6P4T2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Snrnp200Q6P4T2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp200Q6P4T2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp200Q6P4T2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp200Q6P4T2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp200Q6P4T2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp200Q6P4T2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp200Q6P4T2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp200Q6P4T2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp200Q6P4T2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms