Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Odf3b-204ENSMUST00000227834 930 ntBASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Retreg2Q6NS82 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg2Q6NS82 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.3■□□□□ 0.52
Retreg2Q6NS82 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retreg2Q6NS82 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg2Q6NS82 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg2Q6NS82 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retreg2Q6NS82 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.3■□□□□ 0.52
Retreg2Q6NS82 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg2Q6NS82 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Retreg2Q6NS82 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Retreg2Q6NS82 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg2Q6NS82 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg2Q6NS82 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg2Q6NS82 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg2Q6NS82 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg2Q6NS82 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg2Q6NS82 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg2Q6NS82 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg2Q6NS82 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg2Q6NS82 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg2Q6NS82 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.27■□□□□ 0.52
Retreg2Q6NS82 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.27■□□□□ 0.52
Retreg2Q6NS82 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg2Q6NS82 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.27■□□□□ 0.52
Retreg2Q6NS82 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.27■□□□□ 0.52
Retreg2Q6NS82 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms