Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tpm4Q6IRU2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm4Q6IRU2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Tpm4Q6IRU2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm4Q6IRU2 Gm13401-201ENSMUST00000117074 291 ntBASIC19.04■□□□□ 0.64
Tpm4Q6IRU2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm4Q6IRU2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm4Q6IRU2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm4Q6IRU2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm4Q6IRU2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm4Q6IRU2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm4Q6IRU2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tpm4Q6IRU2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.04■□□□□ 0.64
Tpm4Q6IRU2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tpm4Q6IRU2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm4Q6IRU2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm4Q6IRU2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Tpm4Q6IRU2 Dancr-204ENSMUST00000132389 2347 ntBASIC19.02■□□□□ 0.64
Tpm4Q6IRU2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm4Q6IRU2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm4Q6IRU2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.02■□□□□ 0.64
Tpm4Q6IRU2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Tpm4Q6IRU2 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.02■□□□□ 0.64
Tpm4Q6IRU2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Tpm4Q6IRU2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm4Q6IRU2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm4Q6IRU2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tpm4Q6IRU2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tpm4Q6IRU2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tpm4Q6IRU2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm4Q6IRU2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19■□□□□ 0.63
Tpm4Q6IRU2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Gm37179-201ENSMUST00000194862 823 ntBASIC19■□□□□ 0.63
Tpm4Q6IRU2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19■□□□□ 0.63
Tpm4Q6IRU2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Tpm4Q6IRU2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms