Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cep290Q6A078 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cep290Q6A078 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cep290Q6A078 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.36■□□□□ 0.37
Cep290Q6A078 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cep290Q6A078 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cep290Q6A078 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cep290Q6A078 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cep290Q6A078 Gm13186-201ENSMUST00000118031 316 ntBASIC17.36■□□□□ 0.37
Cep290Q6A078 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cep290Q6A078 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cep290Q6A078 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.36■□□□□ 0.37
Cep290Q6A078 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cep290Q6A078 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.35■□□□□ 0.37
Cep290Q6A078 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Gm44872-201ENSMUST00000207864 420 ntBASIC17.35■□□□□ 0.37
Cep290Q6A078 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.35■□□□□ 0.37
Cep290Q6A078 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cep290Q6A078 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cep290Q6A078 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cep290Q6A078 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cep290Q6A078 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cep290Q6A078 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cep290Q6A078 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cep290Q6A078 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Cep290Q6A078 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cep290Q6A078 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.34■□□□□ 0.37
Cep290Q6A078 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cep290Q6A078 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cep290Q6A078 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cep290Q6A078 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cep290Q6A078 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cep290Q6A078 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cep290Q6A078 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cep290Q6A078 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Cep290Q6A078 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.33■□□□□ 0.37
Cep290Q6A078 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cep290Q6A078 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cep290Q6A078 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cep290Q6A078 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cep290Q6A078 Gm25990-201ENSMUST00000102440 86 ntBASIC17.33■□□□□ 0.36
Cep290Q6A078 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cep290Q6A078 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.33■□□□□ 0.36
Cep290Q6A078 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cep290Q6A078 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cep290Q6A078 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cep290Q6A078 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Cep290Q6A078 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cep290Q6A078 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.33■□□□□ 0.36
Cep290Q6A078 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cep290Q6A078 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cep290Q6A078 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cep290Q6A078 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cep290Q6A078 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cep290Q6A078 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Cep290Q6A078 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cep290Q6A078 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Cep290Q6A078 Notumos-201ENSMUST00000151998 2659 ntBASIC17.33■□□□□ 0.36
Cep290Q6A078 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cep290Q6A078 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cep290Q6A078 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.32■□□□□ 0.36
Cep290Q6A078 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cep290Q6A078 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cep290Q6A078 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cep290Q6A078 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cep290Q6A078 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cep290Q6A078 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cep290Q6A078 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cep290Q6A078 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cep290Q6A078 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.32■□□□□ 0.36
Cep290Q6A078 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.32■□□□□ 0.36
Cep290Q6A078 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.32■□□□□ 0.36
Cep290Q6A078 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.32■□□□□ 0.36
Cep290Q6A078 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.32■□□□□ 0.36
Cep290Q6A078 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cep290Q6A078 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cep290Q6A078 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cep290Q6A078 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cep290Q6A078 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Cep290Q6A078 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cep290Q6A078 Gm4535-201ENSMUST00000182274 558 ntBASIC17.31■□□□□ 0.36
Cep290Q6A078 Gm27628-201ENSMUST00000184911 107 ntBASIC17.31■□□□□ 0.36
Cep290Q6A078 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms