Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col11a2Q64739 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Col11a2Q64739 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.63■□□□□ 0.89
Col11a2Q64739 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.63■□□□□ 0.89
Col11a2Q64739 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col11a2Q64739 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col11a2Q64739 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col11a2Q64739 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col11a2Q64739 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col11a2Q64739 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col11a2Q64739 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.62■□□□□ 0.89
Col11a2Q64739 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col11a2Q64739 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Col11a2Q64739 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col11a2Q64739 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col11a2Q64739 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.62■□□□□ 0.89
Col11a2Q64739 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.62■□□□□ 0.89
Col11a2Q64739 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col11a2Q64739 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.62■□□□□ 0.89
Col11a2Q64739 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.62■□□□□ 0.89
Col11a2Q64739 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col11a2Q64739 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.62■□□□□ 0.89
Col11a2Q64739 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col11a2Q64739 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col11a2Q64739 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.62■□□□□ 0.89
Col11a2Q64739 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col11a2Q64739 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col11a2Q64739 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col11a2Q64739 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col11a2Q64739 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.62■□□□□ 0.89
Col11a2Q64739 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col11a2Q64739 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Col11a2Q64739 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.61■□□□□ 0.89
Col11a2Q64739 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Col11a2Q64739 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Col11a2Q64739 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.61■□□□□ 0.89
Col11a2Q64739 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.61■□□□□ 0.89
Col11a2Q64739 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Col11a2Q64739 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Col11a2Q64739 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col11a2Q64739 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Col11a2Q64739 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col11a2Q64739 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col11a2Q64739 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col11a2Q64739 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col11a2Q64739 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.6■□□□□ 0.89
Col11a2Q64739 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.6■□□□□ 0.89
Col11a2Q64739 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Col11a2Q64739 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Col11a2Q64739 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col11a2Q64739 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col11a2Q64739 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col11a2Q64739 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col11a2Q64739 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col11a2Q64739 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col11a2Q64739 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.59■□□□□ 0.89
Col11a2Q64739 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.59■□□□□ 0.89
Col11a2Q64739 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.59■□□□□ 0.89
Col11a2Q64739 Gm15590-201ENSMUST00000078419 552 ntBASIC20.59■□□□□ 0.89
Col11a2Q64739 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Col11a2Q64739 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col11a2Q64739 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col11a2Q64739 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.59■□□□□ 0.89
Col11a2Q64739 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col11a2Q64739 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col11a2Q64739 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col11a2Q64739 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col11a2Q64739 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col11a2Q64739 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col11a2Q64739 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.58■□□□□ 0.89
Col11a2Q64739 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Col11a2Q64739 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Col11a2Q64739 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col11a2Q64739 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col11a2Q64739 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col11a2Q64739 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.58■□□□□ 0.88
Col11a2Q64739 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Col11a2Q64739 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col11a2Q64739 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.58■□□□□ 0.88
Col11a2Q64739 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.58■□□□□ 0.88
Col11a2Q64739 Gm2756-201ENSMUST00000195851 400 ntBASIC20.58■□□□□ 0.88
Col11a2Q64739 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col11a2Q64739 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.57■□□□□ 0.88
Col11a2Q64739 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.57■□□□□ 0.88
Col11a2Q64739 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col11a2Q64739 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms