Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Gm4974-201ENSMUST00000209974 875 ntBASIC12.96□□□□□ -0.33
Zfp248Q640N4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Zfp248Q640N4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Zfp248Q640N4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Zfp248Q640N4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Zfp248Q640N4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Zfp248Q640N4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Zfp248Q640N4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Zfp248Q640N4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Zfp248Q640N4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.95□□□□□ -0.34
Zfp248Q640N4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Trmt13-210ENSMUST00000198454 880 ntBASIC12.95□□□□□ -0.34
Zfp248Q640N4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.95□□□□□ -0.34
Zfp248Q640N4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Zfp248Q640N4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Zfp248Q640N4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Gm37292-201ENSMUST00000192062 758 ntBASIC12.94□□□□□ -0.34
Zfp248Q640N4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.94□□□□□ -0.34
Zfp248Q640N4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.94□□□□□ -0.34
Zfp248Q640N4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Zfp248Q640N4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Zfp248Q640N4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Zfp248Q640N4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Zfp248Q640N4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Zfp248Q640N4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Zfp248Q640N4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Zfp248Q640N4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Zfp248Q640N4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Zfp248Q640N4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Zfp248Q640N4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms