Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ndufa4Q62425 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ndufa4Q62425 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.36□□□□□ -0.43
Ndufa4Q62425 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.36□□□□□ -0.43
Ndufa4Q62425 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ndufa4Q62425 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufa4Q62425 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ndufa4Q62425 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ndufa4Q62425 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.33□□□□□ -0.44
Ndufa4Q62425 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.33□□□□□ -0.44
Ndufa4Q62425 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.33□□□□□ -0.44
Ndufa4Q62425 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ndufa4Q62425 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms