Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ss18Q62280 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.6□□□□□ -0.39
Ss18Q62280 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ss18Q62280 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.6□□□□□ -0.39
Ss18Q62280 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ss18Q62280 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ss18Q62280 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ss18Q62280 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.59□□□□□ -0.39
Ss18Q62280 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ss18Q62280 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ss18Q62280 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ss18Q62280 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ss18Q62280 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ss18Q62280 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ss18Q62280 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ss18Q62280 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ss18Q62280 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ss18Q62280 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ss18Q62280 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ss18Q62280 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.59□□□□□ -0.39
Ss18Q62280 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ss18Q62280 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ss18Q62280 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ss18Q62280 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ss18Q62280 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.58□□□□□ -0.4
Ss18Q62280 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Ss18Q62280 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ss18Q62280 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Ss18Q62280 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ss18Q62280 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ss18Q62280 Gm13148-201ENSMUST00000118892 745 ntBASIC12.58□□□□□ -0.4
Ss18Q62280 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.58□□□□□ -0.4
Ss18Q62280 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.58□□□□□ -0.4
Ss18Q62280 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ss18Q62280 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.58□□□□□ -0.4
Ss18Q62280 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.58□□□□□ -0.4
Ss18Q62280 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.58□□□□□ -0.4
Ss18Q62280 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ss18Q62280 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ss18Q62280 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ss18Q62280 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ss18Q62280 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ss18Q62280 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ss18Q62280 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ss18Q62280 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ss18Q62280 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ss18Q62280 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ss18Q62280 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ss18Q62280 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ss18Q62280 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ss18Q62280 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ss18Q62280 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ss18Q62280 Gm2559-201ENSMUST00000201323 363 ntBASIC12.57□□□□□ -0.4
Ss18Q62280 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ss18Q62280 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ss18Q62280 Gm10602-201ENSMUST00000098239 609 ntBASIC12.57□□□□□ -0.4
Ss18Q62280 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ss18Q62280 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ss18Q62280 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ss18Q62280 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ss18Q62280 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ss18Q62280 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ss18Q62280 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ss18Q62280 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ss18Q62280 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Ss18Q62280 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.56□□□□□ -0.4
Ss18Q62280 Gm11927-201ENSMUST00000118472 759 ntBASIC12.56□□□□□ -0.4
Ss18Q62280 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.56□□□□□ -0.4
Ss18Q62280 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Gm4968-201ENSMUST00000071458 858 ntBASIC12.56□□□□□ -0.4
Ss18Q62280 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Ss18Q62280 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ss18Q62280 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms