Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.11■□□□□ 0.49
Six2Q62232 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.11■□□□□ 0.49
Six2Q62232 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six2Q62232 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six2Q62232 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Six2Q62232 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Six2Q62232 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six2Q62232 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six2Q62232 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six2Q62232 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Six2Q62232 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Six2Q62232 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six2Q62232 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six2Q62232 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six2Q62232 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six2Q62232 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.1■□□□□ 0.49
Six2Q62232 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six2Q62232 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Six2Q62232 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.1■□□□□ 0.49
Six2Q62232 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.1■□□□□ 0.49
Six2Q62232 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.1■□□□□ 0.49
Six2Q62232 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
Six2Q62232 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six2Q62232 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Six2Q62232 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six2Q62232 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Six2Q62232 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six2Q62232 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six2Q62232 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.09■□□□□ 0.49
Six2Q62232 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six2Q62232 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.09■□□□□ 0.49
Six2Q62232 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Six2Q62232 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six2Q62232 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six2Q62232 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.09■□□□□ 0.49
Six2Q62232 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Six2Q62232 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.09■□□□□ 0.49
Six2Q62232 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six2Q62232 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.09■□□□□ 0.49
Six2Q62232 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six2Q62232 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six2Q62232 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six2Q62232 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six2Q62232 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Six2Q62232 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six2Q62232 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six2Q62232 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Six2Q62232 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six2Q62232 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six2Q62232 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Six2Q62232 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Six2Q62232 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Six2Q62232 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Six2Q62232 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
Six2Q62232 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Six2Q62232 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Six2Q62232 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Six2Q62232 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Six2Q62232 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six2Q62232 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six2Q62232 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six2Q62232 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.08■□□□□ 0.48
Six2Q62232 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Six2Q62232 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.08■□□□□ 0.48
Six2Q62232 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.08■□□□□ 0.48
Six2Q62232 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six2Q62232 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six2Q62232 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six2Q62232 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six2Q62232 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six2Q62232 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Six2Q62232 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Six2Q62232 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.08■□□□□ 0.48
Six2Q62232 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six2Q62232 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six2Q62232 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six2Q62232 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
Six2Q62232 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six2Q62232 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six2Q62232 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Six2Q62232 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.07■□□□□ 0.48
Six2Q62232 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Six2Q62232 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms