Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Notch3Q61982 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Notch3Q61982 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Notch3Q61982 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.04□□□□□ -0.32
Notch3Q61982 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Notch3Q61982 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Notch3Q61982 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Notch3Q61982 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.04□□□□□ -0.32
Notch3Q61982 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Notch3Q61982 Gm29518-201ENSMUST00000190858 372 ntBASIC13.04□□□□□ -0.32
Notch3Q61982 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.03□□□□□ -0.32
Notch3Q61982 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.03□□□□□ -0.32
Notch3Q61982 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Notch3Q61982 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Notch3Q61982 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Notch3Q61982 Gm17807-201ENSMUST00000186869 298 ntBASIC13.02□□□□□ -0.32
Notch3Q61982 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.02□□□□□ -0.32
Notch3Q61982 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Notch3Q61982 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Notch3Q61982 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Notch3Q61982 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Notch3Q61982 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Notch3Q61982 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Notch3Q61982 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Notch3Q61982 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Notch3Q61982 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.02□□□□□ -0.33
Notch3Q61982 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Notch3Q61982 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Notch3Q61982 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Notch3Q61982 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.01□□□□□ -0.33
Notch3Q61982 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.01□□□□□ -0.33
Notch3Q61982 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Notch3Q61982 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Notch3Q61982 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.01□□□□□ -0.33
Notch3Q61982 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Notch3Q61982 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Gm13474-201ENSMUST00000122466 815 ntBASIC13.01□□□□□ -0.33
Notch3Q61982 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Notch3Q61982 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Notch3Q61982 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Notch3Q61982 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.01□□□□□ -0.33
Notch3Q61982 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Notch3Q61982 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms