Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Gm11643-201ENSMUST00000119578 864 ntBASIC15.68■□□□□ 0.1
Clcn4Q61418 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Clcn4Q61418 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.68■□□□□ 0.1
Clcn4Q61418 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Clcn4Q61418 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.68■□□□□ 0.1
Clcn4Q61418 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.67■□□□□ 0.1
Clcn4Q61418 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Clcn4Q61418 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.67■□□□□ 0.1
Clcn4Q61418 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.67■□□□□ 0.1
Clcn4Q61418 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.67■□□□□ 0.1
Clcn4Q61418 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Clcn4Q61418 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Clcn4Q61418 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.67■□□□□ 0.1
Clcn4Q61418 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcn4Q61418 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn4Q61418 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.66■□□□□ 0.1
Clcn4Q61418 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn4Q61418 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn4Q61418 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.66■□□□□ 0.1
Clcn4Q61418 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn4Q61418 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.66■□□□□ 0.1
Clcn4Q61418 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.66■□□□□ 0.1
Clcn4Q61418 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.66■□□□□ 0.1
Clcn4Q61418 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn4Q61418 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn4Q61418 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn4Q61418 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn4Q61418 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn4Q61418 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcn4Q61418 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn4Q61418 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn4Q61418 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn4Q61418 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn4Q61418 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn4Q61418 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn4Q61418 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Clcn4Q61418 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn4Q61418 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Clcn4Q61418 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn4Q61418 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn4Q61418 Mir8112-201ENSMUST00000184382 131 ntBASIC15.65■□□□□ 0.1
Clcn4Q61418 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clcn4Q61418 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn4Q61418 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn4Q61418 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Clcn4Q61418 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.65■□□□□ 0.1
Clcn4Q61418 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn4Q61418 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcn4Q61418 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Clcn4Q61418 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn4Q61418 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn4Q61418 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn4Q61418 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Clcn4Q61418 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Clcn4Q61418 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn4Q61418 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn4Q61418 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn4Q61418 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.64■□□□□ 0.09
Clcn4Q61418 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.64■□□□□ 0.09
Clcn4Q61418 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn4Q61418 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Clcn4Q61418 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn4Q61418 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Clcn4Q61418 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.64■□□□□ 0.09
Clcn4Q61418 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.64■□□□□ 0.09
Clcn4Q61418 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn4Q61418 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn4Q61418 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Clcn4Q61418 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Clcn4Q61418 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clcn4Q61418 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn4Q61418 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn4Q61418 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn4Q61418 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn4Q61418 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clcn4Q61418 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms