Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sdf4Q61112 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdf4Q61112 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdf4Q61112 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdf4Q61112 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Sdf4Q61112 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sdf4Q61112 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdf4Q61112 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdf4Q61112 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Sdf4Q61112 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.25■□□□□ 0.35
Sdf4Q61112 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.25■□□□□ 0.35
Sdf4Q61112 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdf4Q61112 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdf4Q61112 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sdf4Q61112 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdf4Q61112 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdf4Q61112 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Sdf4Q61112 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdf4Q61112 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdf4Q61112 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdf4Q61112 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.24■□□□□ 0.35
Sdf4Q61112 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Sdf4Q61112 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sdf4Q61112 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.24■□□□□ 0.35
Sdf4Q61112 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.24■□□□□ 0.35
Sdf4Q61112 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sdf4Q61112 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.24■□□□□ 0.35
Sdf4Q61112 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sdf4Q61112 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdf4Q61112 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sdf4Q61112 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdf4Q61112 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdf4Q61112 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sdf4Q61112 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdf4Q61112 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdf4Q61112 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdf4Q61112 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.23■□□□□ 0.35
Sdf4Q61112 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.23■□□□□ 0.35
Sdf4Q61112 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.23■□□□□ 0.35
Sdf4Q61112 Gm7791-201ENSMUST00000219066 539 ntBASIC17.23■□□□□ 0.35
Sdf4Q61112 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdf4Q61112 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.23■□□□□ 0.35
Sdf4Q61112 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdf4Q61112 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sdf4Q61112 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sdf4Q61112 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdf4Q61112 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sdf4Q61112 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdf4Q61112 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sdf4Q61112 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdf4Q61112 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdf4Q61112 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sdf4Q61112 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdf4Q61112 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdf4Q61112 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.22■□□□□ 0.35
Sdf4Q61112 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdf4Q61112 Gm30025-201ENSMUST00000218555 728 ntBASIC17.22■□□□□ 0.35
Sdf4Q61112 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sdf4Q61112 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdf4Q61112 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sdf4Q61112 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdf4Q61112 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.22■□□□□ 0.35
Sdf4Q61112 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Sdf4Q61112 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdf4Q61112 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdf4Q61112 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdf4Q61112 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdf4Q61112 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sdf4Q61112 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdf4Q61112 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdf4Q61112 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdf4Q61112 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Sdf4Q61112 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdf4Q61112 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdf4Q61112 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.21■□□□□ 0.35
Sdf4Q61112 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sdf4Q61112 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdf4Q61112 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdf4Q61112 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdf4Q61112 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.21■□□□□ 0.35
Sdf4Q61112 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdf4Q61112 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdf4Q61112 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms