Protein–RNA interactions for Protein: Q5XF89

Atp13a3, Probable cation-transporting ATPase 13A3, mousemouse

Predictions only

Length 1,219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a3Q5XF89 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atp13a3Q5XF89 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atp13a3Q5XF89 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Atp13a3Q5XF89 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atp13a3Q5XF89 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.21■□□□□ 0.67
Atp13a3Q5XF89 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Atp13a3Q5XF89 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.2■□□□□ 0.66
Atp13a3Q5XF89 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Gm44450-201ENSMUST00000199528 114 ntBASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Atp13a3Q5XF89 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a3Q5XF89 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a3Q5XF89 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.18■□□□□ 0.66
Atp13a3Q5XF89 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a3Q5XF89 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a3Q5XF89 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.18■□□□□ 0.66
Atp13a3Q5XF89 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.18■□□□□ 0.66
Atp13a3Q5XF89 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.18■□□□□ 0.66
Atp13a3Q5XF89 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Atp13a3Q5XF89 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a3Q5XF89 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp13a3Q5XF89 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.18■□□□□ 0.66
Atp13a3Q5XF89 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp13a3Q5XF89 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Atp13a3Q5XF89 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a3Q5XF89 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a3Q5XF89 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Atp13a3Q5XF89 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Atp13a3Q5XF89 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Atp13a3Q5XF89 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a3Q5XF89 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.16■□□□□ 0.66
Atp13a3Q5XF89 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a3Q5XF89 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a3Q5XF89 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a3Q5XF89 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a3Q5XF89 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.16■□□□□ 0.66
Atp13a3Q5XF89 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp13a3Q5XF89 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a3Q5XF89 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a3Q5XF89 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a3Q5XF89 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a3Q5XF89 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a3Q5XF89 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.15■□□□□ 0.66
Atp13a3Q5XF89 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a3Q5XF89 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a3Q5XF89 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Atp13a3Q5XF89 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a3Q5XF89 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a3Q5XF89 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp13a3Q5XF89 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms