Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim38Q5SZ99 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim38Q5SZ99 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim38Q5SZ99 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim38Q5SZ99 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim38Q5SZ99 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim38Q5SZ99 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.62■□□□□ 0.41
Trim38Q5SZ99 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim38Q5SZ99 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim38Q5SZ99 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim38Q5SZ99 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim38Q5SZ99 Gm7638-201ENSMUST00000121348 967 ntBASIC17.62■□□□□ 0.41
Trim38Q5SZ99 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.62■□□□□ 0.41
Trim38Q5SZ99 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim38Q5SZ99 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim38Q5SZ99 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Trim38Q5SZ99 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim38Q5SZ99 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim38Q5SZ99 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Gm22240-201ENSMUST00000175225 82 ntBASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Il3ra-202ENSMUST00000223589 738 ntBASIC17.6■□□□□ 0.41
Trim38Q5SZ99 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Odf3b-204ENSMUST00000227834 930 ntBASIC17.6■□□□□ 0.41
Trim38Q5SZ99 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Gm10812-201ENSMUST00000099864 546 ntBASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim38Q5SZ99 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.59■□□□□ 0.41
Trim38Q5SZ99 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms