Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ctc1Q5SUQ9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ctc1Q5SUQ9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ctc1Q5SUQ9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ctc1Q5SUQ9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ctc1Q5SUQ9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 Gm27463-201ENSMUST00000183569 57 ntBASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ctc1Q5SUQ9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ctc1Q5SUQ9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ctc1Q5SUQ9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ctc1Q5SUQ9 Gm45058-201ENSMUST00000205810 766 ntBASIC17.98■□□□□ 0.47
Ctc1Q5SUQ9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.98■□□□□ 0.47
Ctc1Q5SUQ9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ctc1Q5SUQ9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ctc1Q5SUQ9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ctc1Q5SUQ9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ctc1Q5SUQ9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.98■□□□□ 0.47
Ctc1Q5SUQ9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ctc1Q5SUQ9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ctc1Q5SUQ9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Gm10517-202ENSMUST00000192970 758 ntBASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Gm18032-201ENSMUST00000222541 538 ntBASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ctc1Q5SUQ9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 Gm13216-201ENSMUST00000117145 591 ntBASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctc1Q5SUQ9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.96■□□□□ 0.46
Ctc1Q5SUQ9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 AA414768-201ENSMUST00000121924 1257 ntBASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ctc1Q5SUQ9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ctc1Q5SUQ9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctc1Q5SUQ9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctc1Q5SUQ9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Ctc1Q5SUQ9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ctc1Q5SUQ9 Gm24841-201ENSMUST00000158676 357 ntBASIC17.94■□□□□ 0.46
Ctc1Q5SUQ9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctc1Q5SUQ9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctc1Q5SUQ9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctc1Q5SUQ9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ctc1Q5SUQ9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms