Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav7d-4Q5R1H9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Gm45102-201ENSMUST00000207427 857 ntBASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav7d-4Q5R1H9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Trav7d-4Q5R1H9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav7d-4Q5R1H9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Trav7d-4Q5R1H9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav7d-4Q5R1H9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav7d-4Q5R1H9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Trav7d-4Q5R1H9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav7d-4Q5R1H9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav7d-4Q5R1H9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav7d-4Q5R1H9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav7d-4Q5R1H9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav7d-4Q5R1H9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-4Q5R1H9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-4Q5R1H9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-4Q5R1H9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-4Q5R1H9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-4Q5R1H9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-4Q5R1H9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-4Q5R1H9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav7d-4Q5R1H9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-4Q5R1H9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Trav7d-4Q5R1H9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-4Q5R1H9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13□□□□□ -0.33
Trav7d-4Q5R1H9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms