Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Gm10812-201ENSMUST00000099864 546 ntBASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdv4Q5R1A3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdv4Q5R1A3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv4Q5R1A3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv4Q5R1A3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv4Q5R1A3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.02□□□□□ -0.16
Trdv4Q5R1A3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv4Q5R1A3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv4Q5R1A3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.02□□□□□ -0.17
Trdv4Q5R1A3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv4Q5R1A3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.02□□□□□ -0.17
Trdv4Q5R1A3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv4Q5R1A3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv4Q5R1A3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv4Q5R1A3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trdv4Q5R1A3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trdv4Q5R1A3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trdv4Q5R1A3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv4Q5R1A3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv4Q5R1A3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv4Q5R1A3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv4Q5R1A3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Gm17661-201ENSMUST00000170317 270 ntBASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Gm38027-201ENSMUST00000192315 235 ntBASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv4Q5R1A3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv4Q5R1A3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14□□□□□ -0.17
Trdv4Q5R1A3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Gm715-201ENSMUST00000117865 831 ntBASIC14□□□□□ -0.17
Trdv4Q5R1A3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Timm23-208ENSMUST00000226683 750 ntBASIC14□□□□□ -0.17
Trdv4Q5R1A3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv4Q5R1A3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trdv4Q5R1A3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms