Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rnf20Q5DTM8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf20Q5DTM8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf20Q5DTM8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf20Q5DTM8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf20Q5DTM8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.24■□□□□ 0.83
Rnf20Q5DTM8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf20Q5DTM8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Rnf20Q5DTM8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.24■□□□□ 0.83
Rnf20Q5DTM8 Il3ra-202ENSMUST00000223589 738 ntBASIC20.24■□□□□ 0.83
Rnf20Q5DTM8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf20Q5DTM8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf20Q5DTM8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rnf20Q5DTM8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf20Q5DTM8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.23■□□□□ 0.83
Rnf20Q5DTM8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf20Q5DTM8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf20Q5DTM8 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.23■□□□□ 0.83
Rnf20Q5DTM8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.23■□□□□ 0.83
Rnf20Q5DTM8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf20Q5DTM8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf20Q5DTM8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf20Q5DTM8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rnf20Q5DTM8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf20Q5DTM8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf20Q5DTM8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf20Q5DTM8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf20Q5DTM8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf20Q5DTM8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rnf20Q5DTM8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Gm3375-201ENSMUST00000203929 796 ntBASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rnf20Q5DTM8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Mir5122-201ENSMUST00000175004 89 ntBASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Gm21814-202ENSMUST00000203277 873 ntBASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.2■□□□□ 0.82
Rnf20Q5DTM8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf20Q5DTM8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms