Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp48Q3V0C5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp48Q3V0C5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp48Q3V0C5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp48Q3V0C5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp48Q3V0C5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp48Q3V0C5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Usp48Q3V0C5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Usp48Q3V0C5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp48Q3V0C5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp48Q3V0C5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Usp48Q3V0C5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Usp48Q3V0C5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp48Q3V0C5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21■□□□□ 0.95
Usp48Q3V0C5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21■□□□□ 0.95
Usp48Q3V0C5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp48Q3V0C5 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21■□□□□ 0.95
Usp48Q3V0C5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp48Q3V0C5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp48Q3V0C5 Gm5864-201ENSMUST00000202263 970 ntBASIC21■□□□□ 0.95
Usp48Q3V0C5 Birc2-201ENSMUST00000054878 378 ntBASIC21■□□□□ 0.95
Usp48Q3V0C5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp48Q3V0C5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21■□□□□ 0.95
Usp48Q3V0C5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp48Q3V0C5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp48Q3V0C5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp48Q3V0C5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp48Q3V0C5 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.99■□□□□ 0.95
Usp48Q3V0C5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp48Q3V0C5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.99■□□□□ 0.95
Usp48Q3V0C5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp48Q3V0C5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp48Q3V0C5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp48Q3V0C5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.99■□□□□ 0.95
Usp48Q3V0C5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp48Q3V0C5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp48Q3V0C5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp48Q3V0C5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp48Q3V0C5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp48Q3V0C5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Gm26039-201ENSMUST00000158152 144 ntBASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.97■□□□□ 0.95
Usp48Q3V0C5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp48Q3V0C5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp48Q3V0C5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp48Q3V0C5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp48Q3V0C5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp48Q3V0C5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp48Q3V0C5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.96■□□□□ 0.95
Usp48Q3V0C5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp48Q3V0C5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp48Q3V0C5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp48Q3V0C5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp48Q3V0C5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.95
Usp48Q3V0C5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp48Q3V0C5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp48Q3V0C5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp48Q3V0C5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Usp48Q3V0C5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp48Q3V0C5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Usp48Q3V0C5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp48Q3V0C5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Usp48Q3V0C5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp48Q3V0C5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp48Q3V0C5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms