Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnga4Q3UW12 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnga4Q3UW12 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.28■□□□□ 0.36
Cnga4Q3UW12 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.28■□□□□ 0.36
Cnga4Q3UW12 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.28■□□□□ 0.36
Cnga4Q3UW12 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.28■□□□□ 0.36
Cnga4Q3UW12 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnga4Q3UW12 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cnga4Q3UW12 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cnga4Q3UW12 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.27■□□□□ 0.36
Cnga4Q3UW12 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.27■□□□□ 0.36
Cnga4Q3UW12 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.27■□□□□ 0.36
Cnga4Q3UW12 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cnga4Q3UW12 Gm10493-201ENSMUST00000097270 612 ntBASIC17.27■□□□□ 0.36
Cnga4Q3UW12 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cnga4Q3UW12 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cnga4Q3UW12 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.27■□□□□ 0.35
Cnga4Q3UW12 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cnga4Q3UW12 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cnga4Q3UW12 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cnga4Q3UW12 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cnga4Q3UW12 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cnga4Q3UW12 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cnga4Q3UW12 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cnga4Q3UW12 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cnga4Q3UW12 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cnga4Q3UW12 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cnga4Q3UW12 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Cnga4Q3UW12 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.26■□□□□ 0.35
Cnga4Q3UW12 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cnga4Q3UW12 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cnga4Q3UW12 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cnga4Q3UW12 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms