Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.51■□□□□ 0.23
Rnf223Q3UV31 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Gm17808-201ENSMUST00000200859 894 ntBASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf223Q3UV31 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Gm13186-201ENSMUST00000118031 316 ntBASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf223Q3UV31 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Phf7-203ENSMUST00000226565 1971 ntBASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Gm7284-201ENSMUST00000131667 944 ntBASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf223Q3UV31 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf223Q3UV31 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf223Q3UV31 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf223Q3UV31 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf223Q3UV31 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf223Q3UV31 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rnf223Q3UV31 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf223Q3UV31 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf223Q3UV31 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.47■□□□□ 0.23
Rnf223Q3UV31 Mir770-201ENSMUST00000103252 94 ntBASIC16.47■□□□□ 0.23
Rnf223Q3UV31 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf223Q3UV31 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rnf223Q3UV31 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf223Q3UV31 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rnf223Q3UV31 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms