Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Phf7-203ENSMUST00000226565 1971 ntBASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Gm14057-201ENSMUST00000120631 482 ntBASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam196aQ3USH1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam196aQ3USH1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam196aQ3USH1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam196aQ3USH1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Fam196aQ3USH1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.02■□□□□ 0.32
Fam196aQ3USH1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Fam196aQ3USH1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam196aQ3USH1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Fam196aQ3USH1 Gm26308-201ENSMUST00000157768 69 ntBASIC17.02■□□□□ 0.32
Fam196aQ3USH1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.02■□□□□ 0.32
Fam196aQ3USH1 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.02■□□□□ 0.32
Fam196aQ3USH1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.02■□□□□ 0.32
Fam196aQ3USH1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Fam196aQ3USH1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam196aQ3USH1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Fam196aQ3USH1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.02■□□□□ 0.31
Fam196aQ3USH1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam196aQ3USH1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam196aQ3USH1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam196aQ3USH1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam196aQ3USH1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Gm15590-201ENSMUST00000078419 552 ntBASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam196aQ3USH1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17■□□□□ 0.31
Fam196aQ3USH1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Fam196aQ3USH1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17■□□□□ 0.31
Fam196aQ3USH1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Fam196aQ3USH1 Gm7230-201ENSMUST00000173026 815 ntBASIC17■□□□□ 0.31
Fam196aQ3USH1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Fam196aQ3USH1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Fam196aQ3USH1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17■□□□□ 0.31
Fam196aQ3USH1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Fam196aQ3USH1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Fam196aQ3USH1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Fam196aQ3USH1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17■□□□□ 0.31
Fam196aQ3USH1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Fam196aQ3USH1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Fam196aQ3USH1 Gm19721-201ENSMUST00000195284 1764 ntBASIC17■□□□□ 0.31
Fam196aQ3USH1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms