Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Gm43183-201ENSMUST00000200632 547 ntBASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cul4aQ3TCH7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cul4aQ3TCH7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Gm12441-201ENSMUST00000121806 588 ntBASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cul4aQ3TCH7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cul4aQ3TCH7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cul4aQ3TCH7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cul4aQ3TCH7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.85■□□□□ 0.45
Cul4aQ3TCH7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cul4aQ3TCH7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cul4aQ3TCH7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cul4aQ3TCH7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cul4aQ3TCH7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cul4aQ3TCH7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Cul4aQ3TCH7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cul4aQ3TCH7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cul4aQ3TCH7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cul4aQ3TCH7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Gm37856-201ENSMUST00000191634 999 ntBASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Gm37025-201ENSMUST00000195159 829 ntBASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cul4aQ3TCH7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cul4aQ3TCH7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cul4aQ3TCH7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cul4aQ3TCH7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cul4aQ3TCH7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms