Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Gm42545-201ENSMUST00000202755 922 ntBASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nhej1Q3KNJ2 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.12■□□□□ 0.49
Nhej1Q3KNJ2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nhej1Q3KNJ2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nhej1Q3KNJ2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nhej1Q3KNJ2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nhej1Q3KNJ2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nhej1Q3KNJ2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nhej1Q3KNJ2 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.12■□□□□ 0.49
Nhej1Q3KNJ2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nhej1Q3KNJ2 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.12■□□□□ 0.49
Nhej1Q3KNJ2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nhej1Q3KNJ2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nhej1Q3KNJ2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nhej1Q3KNJ2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nhej1Q3KNJ2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Gm10602-201ENSMUST00000098239 609 ntBASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhej1Q3KNJ2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nhej1Q3KNJ2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nhej1Q3KNJ2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms