Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Trim72Q1XH17 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim72Q1XH17 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim72Q1XH17 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim72Q1XH17 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.14■□□□□ 0.49
Trim72Q1XH17 Gm18958-201ENSMUST00000174258 762 ntBASIC18.14■□□□□ 0.49
Trim72Q1XH17 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim72Q1XH17 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trim72Q1XH17 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim72Q1XH17 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim72Q1XH17 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim72Q1XH17 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim72Q1XH17 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trim72Q1XH17 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trim72Q1XH17 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Gm27000-201ENSMUST00000182943 842 ntBASIC18.13■□□□□ 0.49
Trim72Q1XH17 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.13■□□□□ 0.49
Trim72Q1XH17 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.13■□□□□ 0.49
Trim72Q1XH17 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim72Q1XH17 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim72Q1XH17 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim72Q1XH17 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.12■□□□□ 0.49
Trim72Q1XH17 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Gm30025-201ENSMUST00000218555 728 ntBASIC18.12■□□□□ 0.49
Trim72Q1XH17 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim72Q1XH17 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.12■□□□□ 0.49
Trim72Q1XH17 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim72Q1XH17 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim72Q1XH17 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim72Q1XH17 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.11■□□□□ 0.49
Trim72Q1XH17 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.11■□□□□ 0.49
Trim72Q1XH17 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim72Q1XH17 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim72Q1XH17 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim72Q1XH17 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim72Q1XH17 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim72Q1XH17 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim72Q1XH17 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim72Q1XH17 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim72Q1XH17 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms