Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Gm13216-201ENSMUST00000117145 591 ntBASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptchd3Q0EEE2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ptchd3Q0EEE2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ptchd3Q0EEE2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ptchd3Q0EEE2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Gm29791-202ENSMUST00000207888 369 ntBASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.45■□□□□ 0.22
Ptchd3Q0EEE2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Gm29257-201ENSMUST00000186115 639 ntBASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Gm4968-201ENSMUST00000071458 858 ntBASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptchd3Q0EEE2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptchd3Q0EEE2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ptchd3Q0EEE2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptchd3Q0EEE2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptchd3Q0EEE2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ptchd3Q0EEE2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ptchd3Q0EEE2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptchd3Q0EEE2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.43■□□□□ 0.22
Ptchd3Q0EEE2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptchd3Q0EEE2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ptchd3Q0EEE2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ptchd3Q0EEE2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Ptchd3Q0EEE2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ptchd3Q0EEE2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Flg-201ENSMUST00000050758 1488 ntBASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ptchd3Q0EEE2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms