Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.23■□□□□ 0.03
Chd8Q09XV5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Tgds-204ENSMUST00000228543 1594 ntBASIC15.22■□□□□ 0.03
Chd8Q09XV5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd8Q09XV5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd8Q09XV5 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd8Q09XV5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd8Q09XV5 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd8Q09XV5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.22■□□□□ 0.03
Chd8Q09XV5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chd8Q09XV5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd8Q09XV5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd8Q09XV5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd8Q09XV5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd8Q09XV5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chd8Q09XV5 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.22■□□□□ 0.03
Chd8Q09XV5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Chd8Q09XV5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd8Q09XV5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd8Q09XV5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd8Q09XV5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Chd8Q09XV5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd8Q09XV5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd8Q09XV5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.21■□□□□ 0.03
Chd8Q09XV5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Chd8Q09XV5 Gm12490-201ENSMUST00000120255 560 ntBASIC15.21■□□□□ 0.03
Chd8Q09XV5 Mir1938-201ENSMUST00000158746 100 ntBASIC15.21■□□□□ 0.03
Chd8Q09XV5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd8Q09XV5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd8Q09XV5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.21■□□□□ 0.03
Chd8Q09XV5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd8Q09XV5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd8Q09XV5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Chd8Q09XV5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd8Q09XV5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Chd8Q09XV5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.21■□□□□ 0.02
Chd8Q09XV5 Gm27306-201ENSMUST00000183970 107 ntBASIC15.21■□□□□ 0.02
Chd8Q09XV5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.2■□□□□ 0.02
Chd8Q09XV5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd8Q09XV5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd8Q09XV5 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd8Q09XV5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.19■□□□□ 0.02
Chd8Q09XV5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd8Q09XV5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd8Q09XV5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd8Q09XV5 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.19■□□□□ 0.02
Chd8Q09XV5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd8Q09XV5 Gm7222-201ENSMUST00000117512 906 ntBASIC15.19■□□□□ 0.02
Chd8Q09XV5 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.19■□□□□ 0.02
Chd8Q09XV5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.19■□□□□ 0.02
Chd8Q09XV5 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.19■□□□□ 0.02
Chd8Q09XV5 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.19■□□□□ 0.02
Chd8Q09XV5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chd8Q09XV5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd8Q09XV5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd8Q09XV5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.19■□□□□ 0.02
Chd8Q09XV5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.19■□□□□ 0.02
Chd8Q09XV5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.19■□□□□ 0.02
Chd8Q09XV5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chd8Q09XV5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.19■□□□□ 0.02
Chd8Q09XV5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd8Q09XV5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd8Q09XV5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd8Q09XV5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.18■□□□□ 0.02
Chd8Q09XV5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd8Q09XV5 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Chd8Q09XV5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.18■□□□□ 0.02
Chd8Q09XV5 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.18■□□□□ 0.02
Chd8Q09XV5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms