Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps45P97390 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps45P97390 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps45P97390 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps45P97390 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps45P97390 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps45P97390 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.57■□□□□ 0.4
Vps45P97390 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps45P97390 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps45P97390 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps45P97390 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.57■□□□□ 0.4
Vps45P97390 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Vps45P97390 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.57■□□□□ 0.4
Vps45P97390 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps45P97390 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.57■□□□□ 0.4
Vps45P97390 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.57■□□□□ 0.4
Vps45P97390 Gm38027-201ENSMUST00000192315 235 ntBASIC17.57■□□□□ 0.4
Vps45P97390 Gm18101-201ENSMUST00000215769 548 ntBASIC17.57■□□□□ 0.4
Vps45P97390 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps45P97390 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps45P97390 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Vps45P97390 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps45P97390 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps45P97390 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps45P97390 Mir5130-201ENSMUST00000175160 84 ntBASIC17.56■□□□□ 0.4
Vps45P97390 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps45P97390 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps45P97390 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps45P97390 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps45P97390 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps45P97390 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vps45P97390 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps45P97390 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps45P97390 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vps45P97390 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.56■□□□□ 0.4
Vps45P97390 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps45P97390 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vps45P97390 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps45P97390 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.55■□□□□ 0.4
Vps45P97390 Ank2-226ENSMUST00000189368 339 ntBASIC17.55■□□□□ 0.4
Vps45P97390 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vps45P97390 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Vps45P97390 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
Vps45P97390 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vps45P97390 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Vps45P97390 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps45P97390 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps45P97390 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps45P97390 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps45P97390 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps45P97390 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps45P97390 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps45P97390 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps45P97390 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps45P97390 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps45P97390 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Vps45P97390 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps45P97390 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps45P97390 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Vps45P97390 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps45P97390 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps45P97390 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps45P97390 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps45P97390 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps45P97390 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps45P97390 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps45P97390 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps45P97390 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Vps45P97390 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps45P97390 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vps45P97390 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps45P97390 Gm17661-201ENSMUST00000170317 270 ntBASIC17.53■□□□□ 0.4
Vps45P97390 Gm2274-201ENSMUST00000184539 609 ntBASIC17.53■□□□□ 0.4
Vps45P97390 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.53■□□□□ 0.4
Vps45P97390 Gm37025-201ENSMUST00000195159 829 ntBASIC17.53■□□□□ 0.4
Vps45P97390 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps45P97390 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps45P97390 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps45P97390 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.53■□□□□ 0.4
Vps45P97390 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Vps45P97390 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms