Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.18□□□□□ -0.46
Rpl39P62892 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.18□□□□□ -0.46
Rpl39P62892 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.18□□□□□ -0.46
Rpl39P62892 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.18□□□□□ -0.46
Rpl39P62892 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39P62892 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.17□□□□□ -0.46
Rpl39P62892 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.17□□□□□ -0.46
Rpl39P62892 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rpl39P62892 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rpl39P62892 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rpl39P62892 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.17□□□□□ -0.46
Rpl39P62892 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rpl39P62892 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.17□□□□□ -0.46
Rpl39P62892 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rpl39P62892 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Rpl39P62892 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.17□□□□□ -0.46
Rpl39P62892 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.17□□□□□ -0.46
Rpl39P62892 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39P62892 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rpl39P62892 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpl39P62892 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Gm10418-201ENSMUST00000100943 576 ntBASIC12.16□□□□□ -0.46
Rpl39P62892 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.16□□□□□ -0.46
Rpl39P62892 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpl39P62892 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.16□□□□□ -0.46
Rpl39P62892 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rpl39P62892 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.16□□□□□ -0.46
Rpl39P62892 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rpl39P62892 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39P62892 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rpl39P62892 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rpl39P62892 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39P62892 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms