Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.91□□□□□ -0.02
Lsm6P62313 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm6P62313 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm6P62313 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Lsm6P62313 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.9□□□□□ -0.02
Lsm6P62313 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.9□□□□□ -0.02
Lsm6P62313 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.9□□□□□ -0.02
Lsm6P62313 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.9□□□□□ -0.02
Lsm6P62313 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.9□□□□□ -0.02
Lsm6P62313 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.9□□□□□ -0.02
Lsm6P62313 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.9□□□□□ -0.02
Lsm6P62313 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lsm6P62313 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.89□□□□□ -0.03
Lsm6P62313 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm6P62313 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Lsm6P62313 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm6P62313 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm6P62313 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm6P62313 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm6P62313 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.89□□□□□ -0.03
Lsm6P62313 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm6P62313 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Lsm6P62313 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm6P62313 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lsm6P62313 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm6P62313 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm6P62313 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.88□□□□□ -0.03
Lsm6P62313 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.88□□□□□ -0.03
Lsm6P62313 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm6P62313 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm6P62313 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Lsm6P62313 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm6P62313 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Lsm6P62313 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.88□□□□□ -0.03
Lsm6P62313 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.88□□□□□ -0.03
Lsm6P62313 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.88□□□□□ -0.03
Lsm6P62313 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm6P62313 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm6P62313 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm6P62313 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm6P62313 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.88□□□□□ -0.03
Lsm6P62313 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm6P62313 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm6P62313 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm6P62313 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.88□□□□□ -0.03
Lsm6P62313 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.88□□□□□ -0.03
Lsm6P62313 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lsm6P62313 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm6P62313 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.87□□□□□ -0.03
Lsm6P62313 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.87□□□□□ -0.03
Lsm6P62313 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm6P62313 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Lsm6P62313 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm6P62313 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm6P62313 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm6P62313 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm6P62313 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.87□□□□□ -0.03
Lsm6P62313 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.87□□□□□ -0.03
Lsm6P62313 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Lsm6P62313 Gm21814-202ENSMUST00000203277 873 ntBASIC14.87□□□□□ -0.03
Lsm6P62313 Gm3375-201ENSMUST00000203929 796 ntBASIC14.87□□□□□ -0.03
Lsm6P62313 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm6P62313 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm6P62313 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm6P62313 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm6P62313 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm6P62313 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lsm6P62313 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Lsm6P62313 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Lsm6P62313 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lsm6P62313 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.86□□□□□ -0.03
Lsm6P62313 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.86□□□□□ -0.03
Lsm6P62313 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lsm6P62313 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms