Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a1P61620 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a1P61620 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a1P61620 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sec61a1P61620 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sec61a1P61620 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sec61a1P61620 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a1P61620 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a1P61620 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a1P61620 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.98□□□□□ -0.01
Sec61a1P61620 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Sec61a1P61620 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sec61a1P61620 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Sec61a1P61620 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Flg-201ENSMUST00000050758 1488 ntBASIC14.98□□□□□ -0.01
Sec61a1P61620 Gm11927-201ENSMUST00000118472 759 ntBASIC14.98□□□□□ -0.01
Sec61a1P61620 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sec61a1P61620 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sec61a1P61620 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sec61a1P61620 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sec61a1P61620 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Sec61a1P61620 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
Sec61a1P61620 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sec61a1P61620 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Sec61a1P61620 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sec61a1P61620 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sec61a1P61620 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.97□□□□□ -0.01
Sec61a1P61620 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sec61a1P61620 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Sec61a1P61620 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sec61a1P61620 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sec61a1P61620 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sec61a1P61620 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sec61a1P61620 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.97□□□□□ -0.01
Sec61a1P61620 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sec61a1P61620 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sec61a1P61620 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sec61a1P61620 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sec61a1P61620 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Sec61a1P61620 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Sec61a1P61620 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.96□□□□□ -0.01
Sec61a1P61620 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.96□□□□□ -0.01
Sec61a1P61620 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sec61a1P61620 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sec61a1P61620 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sec61a1P61620 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sec61a1P61620 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sec61a1P61620 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Sec61a1P61620 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sec61a1P61620 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sec61a1P61620 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sec61a1P61620 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sec61a1P61620 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sec61a1P61620 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sec61a1P61620 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sec61a1P61620 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sec61a1P61620 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sec61a1P61620 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sec61a1P61620 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.95□□□□□ -0.02
Sec61a1P61620 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sec61a1P61620 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sec61a1P61620 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Sec61a1P61620 Gm10252-201ENSMUST00000209541 832 ntBASIC14.95□□□□□ -0.02
Sec61a1P61620 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.95□□□□□ -0.02
Sec61a1P61620 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sec61a1P61620 Mtag2-201ENSMUST00000058665 714 ntBASIC14.95□□□□□ -0.02
Sec61a1P61620 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Sec61a1P61620 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sec61a1P61620 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sec61a1P61620 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sec61a1P61620 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms