Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.37■□□□□ 0.37
Tubgcp3P58854 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.37■□□□□ 0.37
Tubgcp3P58854 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.37■□□□□ 0.37
Tubgcp3P58854 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.37■□□□□ 0.37
Tubgcp3P58854 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp3P58854 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.36■□□□□ 0.37
Tubgcp3P58854 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Gm12085-201ENSMUST00000119263 940 ntBASIC17.35■□□□□ 0.37
Tubgcp3P58854 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tubgcp3P58854 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp3P58854 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp3P58854 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp3P58854 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp3P58854 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp3P58854 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp3P58854 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp3P58854 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Tubgcp3P58854 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp3P58854 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp3P58854 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp3P58854 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp3P58854 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tubgcp3P58854 Gm37025-201ENSMUST00000195159 829 ntBASIC17.33■□□□□ 0.36
Tubgcp3P58854 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp3P58854 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp3P58854 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Tubgcp3P58854 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tubgcp3P58854 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp3P58854 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp3P58854 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp3P58854 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp3P58854 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp3P58854 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp3P58854 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp3P58854 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp3P58854 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp3P58854 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp3P58854 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp3P58854 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.32■□□□□ 0.36
Tubgcp3P58854 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms