Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp20P57748 Gm12644-201ENSMUST00000119935 606 ntBASIC19.44■□□□□ 0.7
Mmp20P57748 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Mmp20P57748 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp20P57748 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.44■□□□□ 0.7
Mmp20P57748 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Mmp20P57748 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp20P57748 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp20P57748 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp20P57748 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.44■□□□□ 0.7
Mmp20P57748 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp20P57748 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp20P57748 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp20P57748 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.43■□□□□ 0.7
Mmp20P57748 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp20P57748 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp20P57748 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp20P57748 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.43■□□□□ 0.7
Mmp20P57748 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp20P57748 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.43■□□□□ 0.7
Mmp20P57748 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp20P57748 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp20P57748 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp20P57748 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp20P57748 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp20P57748 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Mmp20P57748 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp20P57748 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp20P57748 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp20P57748 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp20P57748 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp20P57748 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp20P57748 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.42■□□□□ 0.7
Mmp20P57748 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.42■□□□□ 0.7
Mmp20P57748 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.42■□□□□ 0.7
Mmp20P57748 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp20P57748 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.42■□□□□ 0.7
Mmp20P57748 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.42■□□□□ 0.7
Mmp20P57748 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp20P57748 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Mmp20P57748 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp20P57748 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp20P57748 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp20P57748 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp20P57748 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp20P57748 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp20P57748 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Mmp20P57748 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.41■□□□□ 0.7
Mmp20P57748 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.41■□□□□ 0.7
Mmp20P57748 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Mmp20P57748 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Mmp20P57748 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.41■□□□□ 0.7
Mmp20P57748 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp20P57748 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp20P57748 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp20P57748 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp20P57748 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp20P57748 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp20P57748 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp20P57748 Rprl3-201ENSMUST00000157400 290 ntBASIC19.4■□□□□ 0.7
Mmp20P57748 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp20P57748 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.4■□□□□ 0.7
Mmp20P57748 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.4■□□□□ 0.7
Mmp20P57748 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp20P57748 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp20P57748 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp20P57748 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp20P57748 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Mmp20P57748 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Mmp20P57748 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.39■□□□□ 0.69
Mmp20P57748 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp20P57748 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp20P57748 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp20P57748 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp20P57748 Gm13312-201ENSMUST00000119631 718 ntBASIC19.39■□□□□ 0.69
Mmp20P57748 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp20P57748 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.39■□□□□ 0.69
Mmp20P57748 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp20P57748 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp20P57748 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.39■□□□□ 0.69
Mmp20P57748 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp20P57748 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp20P57748 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp20P57748 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp20P57748 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp20P57748 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms