Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atxn1P54254 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atxn1P54254 Gm24841-201ENSMUST00000158676 357 ntBASIC16.84■□□□□ 0.29
Atxn1P54254 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.84■□□□□ 0.29
Atxn1P54254 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.84■□□□□ 0.29
Atxn1P54254 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.84■□□□□ 0.29
Atxn1P54254 Gm45328-201ENSMUST00000210942 917 ntBASIC16.84■□□□□ 0.29
Atxn1P54254 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atxn1P54254 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Atxn1P54254 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Atxn1P54254 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Atxn1P54254 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atxn1P54254 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atxn1P54254 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atxn1P54254 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atxn1P54254 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Atxn1P54254 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.83■□□□□ 0.29
Atxn1P54254 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.83■□□□□ 0.29
Atxn1P54254 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Atxn1P54254 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Atxn1P54254 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Atxn1P54254 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Atxn1P54254 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.83■□□□□ 0.28
Atxn1P54254 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Atxn1P54254 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Atxn1P54254 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Atxn1P54254 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.83■□□□□ 0.28
Atxn1P54254 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Atxn1P54254 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atxn1P54254 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Atxn1P54254 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.82■□□□□ 0.28
Atxn1P54254 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.82■□□□□ 0.28
Atxn1P54254 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 Gm10566-201ENSMUST00000086739 996 ntBASIC16.82■□□□□ 0.28
Atxn1P54254 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.82■□□□□ 0.28
Atxn1P54254 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atxn1P54254 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Atxn1P54254 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Atxn1P54254 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.81■□□□□ 0.28
Atxn1P54254 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.81■□□□□ 0.28
Atxn1P54254 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.81■□□□□ 0.28
Atxn1P54254 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Atxn1P54254 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atxn1P54254 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Atxn1P54254 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Atxn1P54254 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atxn1P54254 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms