Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.26■□□□□ 0.19
Sox3P53784 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Tgds-204ENSMUST00000228543 1594 ntBASIC16.26■□□□□ 0.19
Sox3P53784 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Sox3P53784 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sox3P53784 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sox3P53784 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox3P53784 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox3P53784 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.25■□□□□ 0.19
Sox3P53784 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sox3P53784 Gm12085-201ENSMUST00000119263 940 ntBASIC16.25■□□□□ 0.19
Sox3P53784 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.25■□□□□ 0.19
Sox3P53784 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox3P53784 Gm8969-201ENSMUST00000199694 526 ntBASIC16.25■□□□□ 0.19
Sox3P53784 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.25■□□□□ 0.19
Sox3P53784 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox3P53784 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sox3P53784 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox3P53784 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox3P53784 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox3P53784 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox3P53784 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox3P53784 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Sox3P53784 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox3P53784 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.24■□□□□ 0.19
Sox3P53784 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox3P53784 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox3P53784 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox3P53784 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sox3P53784 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Sox3P53784 Gm6443-201ENSMUST00000203599 874 ntBASIC16.24■□□□□ 0.19
Sox3P53784 Gm5587-201ENSMUST00000206270 674 ntBASIC16.24■□□□□ 0.19
Sox3P53784 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox3P53784 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox3P53784 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox3P53784 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sox3P53784 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox3P53784 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox3P53784 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox3P53784 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox3P53784 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.23■□□□□ 0.19
Sox3P53784 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox3P53784 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox3P53784 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Sox3P53784 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox3P53784 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox3P53784 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox3P53784 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sox3P53784 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox3P53784 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox3P53784 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.23■□□□□ 0.19
Sox3P53784 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.23■□□□□ 0.19
Sox3P53784 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox3P53784 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.23■□□□□ 0.19
Sox3P53784 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.23■□□□□ 0.19
Sox3P53784 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox3P53784 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.23■□□□□ 0.19
Sox3P53784 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox3P53784 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Sox3P53784 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox3P53784 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox3P53784 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox3P53784 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sox3P53784 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox3P53784 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox3P53784 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox3P53784 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox3P53784 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Sox3P53784 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.22■□□□□ 0.19
Sox3P53784 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox3P53784 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox3P53784 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox3P53784 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox3P53784 Gm18958-201ENSMUST00000174258 762 ntBASIC16.22■□□□□ 0.19
Sox3P53784 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Sox3P53784 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox3P53784 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Sox3P53784 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Sox3P53784 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox3P53784 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.22■□□□□ 0.19
Sox3P53784 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox3P53784 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sox3P53784 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms