Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.92■□□□□ 0.78
LtbrP50284 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LtbrP50284 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LtbrP50284 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.92■□□□□ 0.78
LtbrP50284 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LtbrP50284 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LtbrP50284 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.92■□□□□ 0.78
LtbrP50284 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LtbrP50284 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LtbrP50284 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.92■□□□□ 0.78
LtbrP50284 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LtbrP50284 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LtbrP50284 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LtbrP50284 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LtbrP50284 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.91■□□□□ 0.78
LtbrP50284 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LtbrP50284 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LtbrP50284 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LtbrP50284 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LtbrP50284 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LtbrP50284 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.91■□□□□ 0.78
LtbrP50284 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.91■□□□□ 0.78
LtbrP50284 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LtbrP50284 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LtbrP50284 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LtbrP50284 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LtbrP50284 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.91■□□□□ 0.78
LtbrP50284 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LtbrP50284 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LtbrP50284 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.9■□□□□ 0.78
LtbrP50284 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LtbrP50284 Gm11594-201ENSMUST00000122313 162 ntBASIC19.9■□□□□ 0.78
LtbrP50284 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LtbrP50284 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.9■□□□□ 0.78
LtbrP50284 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LtbrP50284 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.9■□□□□ 0.78
LtbrP50284 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LtbrP50284 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LtbrP50284 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LtbrP50284 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.9■□□□□ 0.78
LtbrP50284 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LtbrP50284 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LtbrP50284 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.89■□□□□ 0.77
LtbrP50284 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
LtbrP50284 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LtbrP50284 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC19.89■□□□□ 0.77
LtbrP50284 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LtbrP50284 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.89■□□□□ 0.77
LtbrP50284 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.89■□□□□ 0.77
LtbrP50284 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.89■□□□□ 0.77
LtbrP50284 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.89■□□□□ 0.77
LtbrP50284 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.89■□□□□ 0.77
LtbrP50284 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LtbrP50284 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LtbrP50284 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LtbrP50284 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LtbrP50284 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.88■□□□□ 0.77
LtbrP50284 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.88■□□□□ 0.77
LtbrP50284 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LtbrP50284 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LtbrP50284 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LtbrP50284 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LtbrP50284 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LtbrP50284 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.88■□□□□ 0.77
LtbrP50284 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LtbrP50284 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.88■□□□□ 0.77
LtbrP50284 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LtbrP50284 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LtbrP50284 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.88■□□□□ 0.77
LtbrP50284 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
LtbrP50284 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LtbrP50284 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LtbrP50284 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LtbrP50284 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LtbrP50284 Gm1401-201ENSMUST00000122048 772 ntBASIC19.87■□□□□ 0.77
LtbrP50284 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.87■□□□□ 0.77
LtbrP50284 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.87■□□□□ 0.77
LtbrP50284 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LtbrP50284 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LtbrP50284 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LtbrP50284 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LtbrP50284 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Gm7063-201ENSMUST00000186840 981 ntBASIC19.86■□□□□ 0.77
LtbrP50284 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.86■□□□□ 0.77
LtbrP50284 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LtbrP50284 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LtbrP50284 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms