Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC11.15□□□□□ -0.62
Xcl1P47993 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Xcl1P47993 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC11.15□□□□□ -0.62
Xcl1P47993 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.15□□□□□ -0.62
Xcl1P47993 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Xcl1P47993 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Xcl1P47993 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Xcl1P47993 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Xcl1P47993 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Xcl1P47993 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Xcl1P47993 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Xcl1P47993 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Xcl1P47993 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Xcl1P47993 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.14□□□□□ -0.63
Xcl1P47993 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.14□□□□□ -0.63
Xcl1P47993 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
Xcl1P47993 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC11.14□□□□□ -0.63
Xcl1P47993 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC11.14□□□□□ -0.63
Xcl1P47993 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Xcl1P47993 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC11.14□□□□□ -0.63
Xcl1P47993 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Xcl1P47993 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.13□□□□□ -0.63
Xcl1P47993 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.13□□□□□ -0.63
Xcl1P47993 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Xcl1P47993 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Xcl1P47993 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Xcl1P47993 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Xcl1P47993 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC11.13□□□□□ -0.63
Xcl1P47993 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC11.13□□□□□ -0.63
Xcl1P47993 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC11.13□□□□□ -0.63
Xcl1P47993 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC11.13□□□□□ -0.63
Xcl1P47993 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Xcl1P47993 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
Xcl1P47993 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Xcl1P47993 Gm37563-201ENSMUST00000192580 1513 ntBASIC11.13□□□□□ -0.63
Xcl1P47993 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.13□□□□□ -0.63
Xcl1P47993 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Xcl1P47993 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Xcl1P47993 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Xcl1P47993 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Xcl1P47993 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Xcl1P47993 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Xcl1P47993 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Xcl1P47993 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms