Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4bP46467 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.28■□□□□ 0.36
Vps4bP46467 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4bP46467 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps4bP46467 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4bP46467 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4bP46467 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Vps4bP46467 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4bP46467 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.27■□□□□ 0.36
Vps4bP46467 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Vps4bP46467 Gm37856-201ENSMUST00000191634 999 ntBASIC17.27■□□□□ 0.36
Vps4bP46467 Gm10517-202ENSMUST00000192970 758 ntBASIC17.27■□□□□ 0.36
Vps4bP46467 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.27■□□□□ 0.36
Vps4bP46467 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4bP46467 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4bP46467 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps4bP46467 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.27■□□□□ 0.35
Vps4bP46467 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps4bP46467 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps4bP46467 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps4bP46467 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps4bP46467 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps4bP46467 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps4bP46467 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Vps4bP46467 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps4bP46467 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps4bP46467 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps4bP46467 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.26■□□□□ 0.35
Vps4bP46467 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Vps4bP46467 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps4bP46467 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.26■□□□□ 0.35
Vps4bP46467 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Vps4bP46467 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4bP46467 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4bP46467 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4bP46467 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4bP46467 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4bP46467 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.25■□□□□ 0.35
Vps4bP46467 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.25■□□□□ 0.35
Vps4bP46467 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.25■□□□□ 0.35
Vps4bP46467 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.25■□□□□ 0.35
Vps4bP46467 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.25■□□□□ 0.35
Vps4bP46467 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4bP46467 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4bP46467 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4bP46467 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Vps4bP46467 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4bP46467 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Vps4bP46467 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4bP46467 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4bP46467 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps4bP46467 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Vps4bP46467 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Vps4bP46467 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.24■□□□□ 0.35
Vps4bP46467 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Vps4bP46467 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Vps4bP46467 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.24■□□□□ 0.35
Vps4bP46467 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.24■□□□□ 0.35
Vps4bP46467 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps4bP46467 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4bP46467 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.23■□□□□ 0.35
Vps4bP46467 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4bP46467 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.23■□□□□ 0.35
Vps4bP46467 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Vps4bP46467 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Vps4bP46467 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.23■□□□□ 0.35
Vps4bP46467 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4bP46467 Gm13836-201ENSMUST00000121159 501 ntBASIC17.23■□□□□ 0.35
Vps4bP46467 Gm24841-201ENSMUST00000158676 357 ntBASIC17.23■□□□□ 0.35
Vps4bP46467 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.23■□□□□ 0.35
Vps4bP46467 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.23■□□□□ 0.35
Vps4bP46467 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4bP46467 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.23■□□□□ 0.35
Vps4bP46467 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4bP46467 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4bP46467 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4bP46467 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps4bP46467 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4bP46467 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4bP46467 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.22■□□□□ 0.35
Vps4bP46467 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4bP46467 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.22■□□□□ 0.35
Vps4bP46467 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4bP46467 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps4bP46467 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms