Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.26■□□□□ 0.19
Sox18P43680 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox18P43680 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox18P43680 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.25■□□□□ 0.19
Sox18P43680 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sox18P43680 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Sox18P43680 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.25■□□□□ 0.19
Sox18P43680 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Sox18P43680 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.25■□□□□ 0.19
Sox18P43680 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox18P43680 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.25■□□□□ 0.19
Sox18P43680 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Sox18P43680 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox18P43680 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox18P43680 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sox18P43680 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox18P43680 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox18P43680 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Sox18P43680 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Sox18P43680 Tgds-204ENSMUST00000228543 1594 ntBASIC16.25■□□□□ 0.19
Sox18P43680 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox18P43680 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox18P43680 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox18P43680 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Sox18P43680 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox18P43680 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Sox18P43680 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox18P43680 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox18P43680 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.24■□□□□ 0.19
Sox18P43680 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Sox18P43680 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.24■□□□□ 0.19
Sox18P43680 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.24■□□□□ 0.19
Sox18P43680 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox18P43680 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sox18P43680 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox18P43680 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox18P43680 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.24■□□□□ 0.19
Sox18P43680 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Sox18P43680 Gm15372-201ENSMUST00000120729 834 ntBASIC16.24■□□□□ 0.19
Sox18P43680 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.24■□□□□ 0.19
Sox18P43680 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox18P43680 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Sox18P43680 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.24■□□□□ 0.19
Sox18P43680 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.24■□□□□ 0.19
Sox18P43680 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.24■□□□□ 0.19
Sox18P43680 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox18P43680 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox18P43680 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sox18P43680 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox18P43680 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Sox18P43680 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox18P43680 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox18P43680 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox18P43680 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Sox18P43680 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox18P43680 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox18P43680 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox18P43680 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Sox18P43680 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox18P43680 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Sox18P43680 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox18P43680 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox18P43680 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Sox18P43680 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.23■□□□□ 0.19
Sox18P43680 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox18P43680 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox18P43680 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox18P43680 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox18P43680 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox18P43680 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox18P43680 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox18P43680 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.22■□□□□ 0.19
Sox18P43680 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox18P43680 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sox18P43680 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Sox18P43680 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sox18P43680 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.22■□□□□ 0.19
Sox18P43680 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox18P43680 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox18P43680 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox18P43680 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.22■□□□□ 0.19
Sox18P43680 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox18P43680 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox18P43680 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sox18P43680 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox18P43680 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox18P43680 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sox18P43680 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox18P43680 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sox18P43680 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox18P43680 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox18P43680 Gm11434-201ENSMUST00000122379 629 ntBASIC16.21■□□□□ 0.19
Sox18P43680 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms