Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Msh2P43247 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.52■□□□□ 0.4
Msh2P43247 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.52■□□□□ 0.4
Msh2P43247 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.52■□□□□ 0.4
Msh2P43247 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Msh2P43247 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Msh2P43247 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Msh2P43247 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Msh2P43247 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Msh2P43247 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Msh2P43247 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.51■□□□□ 0.39
Msh2P43247 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Msh2P43247 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Msh2P43247 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Mir6349-201ENSMUST00000184059 97 ntBASIC17.51■□□□□ 0.39
Msh2P43247 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Msh2P43247 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.51■□□□□ 0.39
Msh2P43247 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh2P43247 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Msh2P43247 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Msh2P43247 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh2P43247 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh2P43247 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh2P43247 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh2P43247 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh2P43247 Mir2861-201ENSMUST00000175539 82 ntBASIC17.5■□□□□ 0.39
Msh2P43247 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.5■□□□□ 0.39
Msh2P43247 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh2P43247 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh2P43247 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh2P43247 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Msh2P43247 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.5■□□□□ 0.39
Msh2P43247 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh2P43247 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.5■□□□□ 0.39
Msh2P43247 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.5■□□□□ 0.39
Msh2P43247 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh2P43247 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.49■□□□□ 0.39
Msh2P43247 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Msh2P43247 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Gm10698-201ENSMUST00000182663 604 ntBASIC17.49■□□□□ 0.39
Msh2P43247 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh2P43247 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.49■□□□□ 0.39
Msh2P43247 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.48■□□□□ 0.39
Msh2P43247 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh2P43247 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh2P43247 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh2P43247 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh2P43247 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh2P43247 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh2P43247 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.48■□□□□ 0.39
Msh2P43247 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.48■□□□□ 0.39
Msh2P43247 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Msh2P43247 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh2P43247 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Msh2P43247 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.48■□□□□ 0.39
Msh2P43247 Gm29791-202ENSMUST00000207888 369 ntBASIC17.48■□□□□ 0.39
Msh2P43247 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Msh2P43247 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh2P43247 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh2P43247 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh2P43247 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh2P43247 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.48■□□□□ 0.39
Msh2P43247 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Msh2P43247 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh2P43247 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh2P43247 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Msh2P43247 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh2P43247 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh2P43247 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.47■□□□□ 0.39
Msh2P43247 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms