Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cd9P40240 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd9P40240 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Cd9P40240 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd9P40240 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd9P40240 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cd9P40240 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cd9P40240 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cd9P40240 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cd9P40240 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.74■□□□□ 0.27
Cd9P40240 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd9P40240 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.74■□□□□ 0.27
Cd9P40240 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.74■□□□□ 0.27
Cd9P40240 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd9P40240 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cd9P40240 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd9P40240 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd9P40240 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.74■□□□□ 0.27
Cd9P40240 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cd9P40240 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.74■□□□□ 0.27
Cd9P40240 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cd9P40240 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cd9P40240 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cd9P40240 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.74■□□□□ 0.27
Cd9P40240 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cd9P40240 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cd9P40240 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cd9P40240 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cd9P40240 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Gm37055-201ENSMUST00000191866 133 ntBASIC16.73■□□□□ 0.27
Cd9P40240 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Gm5417-201ENSMUST00000079706 384 ntBASIC16.73■□□□□ 0.27
Cd9P40240 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Cd9P40240 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd9P40240 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd9P40240 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd9P40240 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cd9P40240 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cd9P40240 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cd9P40240 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.72■□□□□ 0.27
Cd9P40240 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd9P40240 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Cd9P40240 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd9P40240 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.72■□□□□ 0.27
Cd9P40240 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.72■□□□□ 0.27
Cd9P40240 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cd9P40240 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.72■□□□□ 0.27
Cd9P40240 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Cd9P40240 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.72■□□□□ 0.27
Cd9P40240 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Cd9P40240 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cd9P40240 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cd9P40240 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd9P40240 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd9P40240 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Cd9P40240 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd9P40240 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cd9P40240 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cd9P40240 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Cd9P40240 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd9P40240 Gm13186-201ENSMUST00000118031 316 ntBASIC16.71■□□□□ 0.27
Cd9P40240 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.71■□□□□ 0.27
Cd9P40240 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd9P40240 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd9P40240 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.71■□□□□ 0.27
Cd9P40240 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cd9P40240 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cd9P40240 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd9P40240 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd9P40240 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cd9P40240 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cd9P40240 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd9P40240 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cd9P40240 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd9P40240 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd9P40240 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.7■□□□□ 0.26
Cd9P40240 Gm11539-201ENSMUST00000119837 557 ntBASIC16.7■□□□□ 0.26
Cd9P40240 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.7■□□□□ 0.26
Cd9P40240 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.7■□□□□ 0.26
Cd9P40240 Gm30025-201ENSMUST00000218555 728 ntBASIC16.7■□□□□ 0.26
Cd9P40240 Gm7370-201ENSMUST00000219471 767 ntBASIC16.7■□□□□ 0.26
Cd9P40240 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd9P40240 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd9P40240 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd9P40240 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd9P40240 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd9P40240 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms